We're a little crazy, about science!

Posts tagged “school

Process the data!

This is what raw EEG data looks like. Seriously, it’s a bunch of squiggles. However, we can make sense of it and we can even write some code to make sense of it in real-time so you can control things with your brain!!! <EVIL LAUGH>

It’s a process… that’s for sure. So you’re a scientist and you collect a ton of data, well now what? We’re talking about me of course. I did it, I collected a ton of data and now I need to do something useful with it. This is the part I wish I could skip over and get to the part where I get all the cool results, but I guess we’ve all got to start somewhere.

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A new chapter and a look back

We’re looking forward today… while looking back too. I did a big thing! I finished my 365 days of academia goal, it felt too big to do, but here we are. So what’s next? Well we’re going to talk about where we are, where we were, and what’s coming, so let’s get to it!

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The end

I fully and completely wanted to die. I like starting stories of my life off that way so you set your expectations low and your pity high. I wanted to die and I tried to kill myself the best way I could think of, obviously it didn’t take. Today is the end of my 365 days of academia project and I feel like looking back, way back. If you feel like reading a super depressing tale, then this is for you!

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Day 364: The lazy goals

An old photo, but one that I think came out nice.

Awhile back I made some goals for myself. They weren’t your normal everyday kind of go get em’ goals, they were what I call lazy goals. That’s right as a full grown adult I reserve the right to have lazy goals. I even check them off on a list, seriously. You should too, it really does help remind you to take a break.

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Day 363: Solid Modeling – Week 10

Dancing tree

This has nothing to do with today’s post, it’s just the most cursed thing I’ve created in SolidWorks.

All good things come to an end. It’s week ten and officially our last post in this quick run through. As always we use FREE SOFTWARE to do this, so if you’re just joining in you can find the  full course in the Solid Modeling for Beginners category and you don’t need to spend money to learn. Since this is our last post I wanted to do something a little different today, let’s get started!

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Day 362: Experiment two

Just a giant case full of the equipment I borrowed from my university for experiments. Pretty sure the school’s office staff thing I was robbing the place though.

Well today is going to be a quick recap of my experiment yesterday. This will be just as much for me as it is for all of you. While I can’t go into the experiment details (since I’m working to publish this) I can give a pretty good overview like I did the last time around.

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Day 361: Accidental history

Impostor syndrome
Art by: xkcd

Ever wake up one morning and realize you’re exactly where you wanted to be. That you’re in a place you never even dared to dream you could reach because, well it was silly to think you could accomplish something like that. Dreams that big weren’t meant for people like you, so you didn’t even bother to think you could get there. Yet… here we are.

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Day 360: Second experiment

Computer

The computer I use to process all my data, even with this it takes FOREVER to finish processing.

Well tomorrow is my second experiment. To be clear, it’s technically the same experiment, just a second person, so maybe it would be better to call it trial two? In any case, while the last one went (mostly) well, there are a few things I’m changing to make this next one even better. Sometimes when you prep for an experiment, you don’t realize what you’re forgetting until you can’t do it, so we’re correcting that this time.

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Day 359: Car problems

Engine

Thought it was the PCV valve, but nope…

Well if things weren’t bad enough as it is with my own little world, we get to add car troubles to the list. Dealing with issues like this during normal times isn’t so bad, besides the bill that is, but this isn’t normal times. Nope, we’re dealing with a pandemic, school is about to start, and to top it off, I firmly do not have the money to fix the damn car, what’s a guy to do?

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Day 358: One small step

Dream big

Sometimes are points in life that you can clearly define as the before and the after. As a child sometimes those points are simple milestones growing up, starting a new school for example or moving to a new town. There is the before and the after. As you get older those points become few and far between. For example, you started a new job. Unless it’s your dream job, you don’t really think of it as one of these points and everything just blurs together. Thus the bar seems to get higher and higher as we age. Today I had one of those points.

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Day 357: Thoughts from the lab

Case

My giant very suspicious case full of equipment from my school lab.

Well today is a busy day! I’ve got a lot going on so hopefully by the time you read this I’ll have all the setup taken care of. Working in two labs seems like a fun and interesting way to do experiments and it is! It’s also a huge pain.

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Day 356: Solid Modeling – Week 9

Lamp render

This week we’re giving our lamp the finishing touches, including the plug! I decided mine needed a table top to sit on this week, but you don’t need to do that if you’re not feeling it.

It’s week nine! Welcome, to my little solid modeling course. As usual, we’re using FREE SOFTWARE¬†to do this, I feel that everyone should be able to learn if they want and this was the easiest way to do that. If you’re just finding my little series, you can find the full course in the Solid Modeling for Beginners category. For everyone else, we’re finishing our lamp today (for real this time!) and next week is the last week in the course! Let’s do this!

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Day 354: Even more paper edits…

bad writer

These feels brought to you by: phdcomics

Whhhhhyyyy!!! Okay it’s not that bad, or maybe it is. I have yet more paper edits to do. It’s frustrating I just really want to be done with this paper and it doesn’t seem to want to end. I’m trying to keep my eye on the prize and do this right, it’s just soooo freaking difficult. I just want this done.

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Day 353: Experimental prep

Matlab

Sometimes a parfor loop in just doesn’t cut it because the things you want to do in that loop aren’t allowed (like save or load data a certain way). In those cases (see above) I can run multiple instances of MATLAB and process my data much more efficiently than if I did it one at a time. In this case I had 8 subjects that needed a rather long mathematical operation performed, so I did it all at the same time. It’s a little silly, but it worked! If you didn’t know you could do that, now you do!

Yesterday I told the story of how we got to this point, a long two year journey and next week I finally get to take the next step. It’s exciting, but it also means because of my flare-up, I’m behind on what I need to do to be ready. Not to worry though, I’m taking it slow so I don’t make whatever I have worse. What goes into an experiment like this? I’m glad you asked!

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Day 352: My experiment is coming!!

EEG Cap

I just really like how this photo came out. Here’s one of my lab mates gelling the electrodes for a pseudo-experiment. The scary looking syringe has a blunt tipped needle, we don’t break the skin in our lab so no pain, just a bit of gel to wash out of the hair once completed.

Okay I’ve got an experiment update today and I’m really excited to share because it feels real finally. I know I already wrote about some of this, but when I reread my previous post, it felt disjointed so let’s go over how we got here and what’s coming. I’m excited, are you excited? I’m excited!

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Day 351: Digital color

Online persona

Anger, after thinking about it, it was anger I felt. Not at anyone in particular, but I was angry and hurt and a lot of other similar emotions, but I was angry most of all. People kept letting me down and it took a chance twitter conversation for me to realize why I was yet again left feeling so fucking angry.

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Day 350: In construction…

extruder

I redesigned my extruder to make it beefier, this has nothing to do with the post, but I’m really proud of it and wanted to share. Haha

Well today despite feeling like refried dog poop I have to go do experiments. It’s part of the job and to be honest I want to do it even though I feel like dried monkey vomit. I could go on, but you get the picture. I do have some more good news not related to yesterday’s news. So that is the conversation for the day.

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Day 349: A story in three emails

Drowning

I was awarded something, we’ll get to the what shortly. I was awarded something and I was excited because it felt like validation of my work. It felt good to have people take notice of my accomplishments. There are precious few times in my life where I’ve got to feel like someone selected me out of a group as exceptional. Here I was being nominated for something! I was walking in the clouds. I could do anything, be ANYTHING.

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Day 348: Solid Modeling – Week 8

Finished Lamp

Left my lamp on in case you needed some light. While we didn’t finish the lamp today (boo) we got pretty far. We’ll finish it next week, but I don’t feel well so I needed to stop, sorry!

Welcome back or maybe welcome aboard! This is week eight of my online solid modeling course. As always we use FREE SOFTWARE for this class so no matter who you are, if you have internet access you can do this (seriously, it’s all cloud based so you don’t even need a fast computer!). If you’re just finding my little corner of the internet, never fear you can find all the courses in the super useful Solid Modeling for Beginners category. They get listed in reverse order, so work your way up from the bottom. Now that we’ve finished the intro let’s dive in!

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Day 347: The precipice of … something

precipice

Today is a mash of things, because frankly I still am not feeling good. My the scaly bits on my hands, face, and apparently elbows (missed that one until last night) haven’t gotten worse (yay), but they haven’t gotten better either (boo). On one hand it’s a realization that whatever is wrong with me was worse than I had thought, on the other, the world still moves forward and unfortunately I have work to do, so what’s a guy to do?

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Day 346: What is going on with me?

exhaustion

It’s going to sound like depression. I realize that as we dive into today. I don’t normally do this, but I’m rewriting this intro because I know what it sounds like. It’s not that, this is something else and it worries me. I know depression, I’m good friends with depression, this is something different so don’t tell me it’s depression, it’s not I promise. It just happens to be worse than I can ever remember right as I’m dealing with the worst flare up [of whatever I have going on] in my entire life, so it couldn’t be a coincidence … could it?

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Day 345: Undergrad research presentations

Virtual classroom

Well today is day one of three for wrapping up our undergrad/high school research experience. We had a group of about 50 I think, just in our lab and a good portion of them were high school students. Because we’re living in a pandemic, this was all done virtually! Today we get the first glimpse into how we did as mentors.

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Day 344: In which we are reminded I’m not that smart

Depression

It will pass, it always does, but for now I feel like I’ve been punched in the gut. I don’t enjoy the feeling of being average, or more than likely below average. It means I have to do twice the work for half the result. I see genuine greatness and know that no matter how hard I try, that will always be out of reach for me. What do you do when you want something so bad you would die to get it and you know you will never reach your goal?

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Day 343: On lab equipment

BrokenLaser1

Luckily this wasn’t my fault, but it does make for a good story now.

It was bound to happen eventually. We all knew it would, but we didn’t expect it to fail in such a spectacular manner. That is to say, all at once. One of the people I’m mentoring checked out some lab equipment since we had come up with a way to do experiments from the comfort (see: safety) of her home. That was the plan anyway…

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Day 342: When stress hurts

Drawing of a man with cracks forming at the back of the neck. He looks sad, looking down.

Drawing of a man with cracks forming at the back of the neck. He looks sad, looking down.

I have a lot of disabilities. Some are more debilitating than others for sure, most are just annoyances or give me weird quirks that people sometimes are frustrated with, other times get a laugh from. For the past few days I’ve been dealing with a flare up so bad I’ve never experienced anything like it in my life. It was a painful reminder that I was in fact stressed.

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Day 341: Solid Modeling – Week 7

Lamp Render

If you’re following along you’ve made it to week seven! This course is taught using FREE SOFTWARE so if you ever wanted to learn how to solid model, this course is the one for you. If you’re just joining then you can find all of our classes listed here in our Solid Modeling for Beginners category. They are in reverse order, so start at the bottom. Today we are setting aside our lightbulb for a moment to create something to put it in. I’ve given up keeping what we’re doing a secret (since I always put the final product in the header image anyway). So with that let’s get to it!

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Day 340: Writing… a lot.

once upon

This is how I start all my technical writing.

Another day, another set of problems. So what better way to put off my writing for the day than to write about not wanting to write. I feel like I’m living in a meme all of a sudden. Today I’ve got about 4353453421 things to write, give or take 4. Is it odd that I would rather be writing this than any of the stuff that matters?

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Day 339: What will school look like?

School

Here in the US we paused, it was only for a moment, it wasn’t long enough, and not everyone did it, but we paused. Then just as quickly as we tried to adapt to the changing times we went back to pretending everything was normal. Beaches opened, restaurants opened, bars opened, we saw celebrations and parties and we ignored a single digit daily death count, which turned into a double digit, then triple digit, now we’re hovering in at roughly 1000 deaths a day from the pandemic.

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Day 338: Feeling stuck, again

feeling stuck

I’ve probably mentioned this before, but I feel stuck. With the pandemic going on and the protests (Which are still happening!) I don’t feel like there has been any forward movement in anything I’ve been involved with. I hate feeling like this, it’s so frustrating especially when I feel like I’m drowning in work to be done.

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Day 335: Solid Modeling – Week 6

Light bulb render

Finishing our bulb today!! Wooo!!!

Welcome to week six! As always, this is a free class using FREE SOFTWARE. If you want to learn how to solid model, but couldn’t afford fancy or expensive software, then this course is for you. We’ll be taking things step by step so you (hopefully) will be able to follow along easily. If this is your first visit to my lovely series, then I would suggest you start at week one, which you can find in our incredibly helpful category Solid Modeling for Beginners. Today we’re going to finish our project from last week and make a super neat light bulb!

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Day 334: 3D printing, my final summer class

Robot parts

One of the slides I used in my 3D printing course, this was the robot I designed and 3D printed (prior to assembly) for my Masters degree.

Well I got a chance to give my last lecture yesterday (virtually of course) on 3D printing. I worked literally weeks to get everything ready and it went off (mostly) without a hitch. The world of 3D printing is full of vast, multifaceted, and divergent technologies with more applications than I could possibly list in a single lecture. In fact, they offer entire 12 week courses on 3D printing, so I had to cram everything together into a nice 1-2 hour presentation, where to start?!

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Day 333: Solid modeling course day 3

3D printer

My 3D printer still working hard, but I’m still having troubles!

Yesterday was the last day for my solid modeling class and surprisingly I got more questions than the previous days so that made me very happy. Today is my 3D printing course, so we’ll talk about how that went tomorrow (and push back our online 3D printing course by a day sadly).

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Day 332: Solid modeling course day 2

Printer

Yep, still dealing with printing issues so I have the dual extruder on. Ugh!!!!!! 5 HOURS still left on this print. Why does 3D printing have to be so sloooooooow?!

Well yesterday was day 2 of my solid modeling course, today is my last day of the class. Unfortunately tomorrow is my 3D printing course and I still haven’t got my printer well behaved yet. I guess we get to see all the 3D printing troubles! In any case, let’s talk about how the class went yesterday and what I have planned for today.

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Day 331: Solid modeling course day 1

20200715_134927

The dual extruder attachment, the current bane of my existence!

Well can’t complain too much about the first course. I’m used to people talking to me so it was an odd feeling talking into a screen with no one talking back. I had a few questions, but mostly the course was on how to think about solid modeling, so maybe not a lot of room for questions?

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Day 330: I’m teaching this week!

Harbinger

I love mass effect, so I really thought this was a perfect header image for the post since I am… assuming control!

Well I mentioned it a few days ago, but it’s day one of four today. I’m teaching three courses on solid modeling and one on 3D printing * Shakes fist at 3D printer who keeps giving me problems * and I figure I can talk about how my classes go after the fact, but let’s talk about my prep for these classes so my students get the most out of what I have to teach them.

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Day 329: More 3D printing issues!

Cat boss

My boss is not happy with the work I’m doing, you can tell since she didn’t want to look at me when I took this photo.

I’m giving a class on 3D printing this week and of course my printer decides it wants to throw a fit. So my print had to be stopped (18 hours in) and the printer needed a good talking to. It’s not the printers fault, maintenance happens, so let’s talk more about my poor FDM printer (Acronym defined yesterday).

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Day 328: 3D printing… ugh

3D printing

Well it’s time, in a few short days I’ll be doing a marathon session of courses for the summer interns. I admit it I bit off a lot! I’m doing three solid modeling courses, so the basics, plus a 3D printing class. Today we’re talking 3D printing because, well it’s a headache even though the prints themselves can be worth the pain. I know if I can pull off printing what I’m working on now it will be worth it… I hope.

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Day 327: Solid Modeling – Week 5

Light bulb render

Okay everyone, I had a bright idea for our sphere… get it, get it!?!

Wow, week five already! As per my usual intro, this is a free class using FREE software¬†so if you ever wanted to create a 3D model, this is for you and all you need is internet access to use the program we will be using. Now if you are just joining you’re going to want to start at week one, which you can find all the posts in the super lovely Solid Modeling for Beginners category. We finally did it, last week we made something cool looking! Today we’re going to expand on that and use what we learned to create another awesome thing!

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Day 324: Rewriting

edits

Today is a bunch of meetings and a bunch of editing. As I mentioned (or at least think I mentioned here), I had to meet with the senior author for the paper I’m working on and I got a lot of feedback, some of it was good, most of it meant more work for me. That’s the process though, write, rewrite, re-re-re-re…rewrite.

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Day 323: Skype a Scientist!

wiring

Today is going to be fun, I’ve got a ton of meetings, but I also get to do outreach. If you’re a scientist, you can do it too, no matter where you are in the field, sign up at Skype a Scientist. While I wanted to write this post before my sessions I ended up having to write it afterwards so let’s get into what I talk about and how it went.

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Day 320: Solid Modeling – Week 4

Finished Rocket

We’re making something a little more exciting than a cube today. Yay!

Welcome to week four! For those of us just tuning in, this is a class for solid modeling using FREE software, so if you have internet access, you can do this too! You can find the whole course in the handy Solid Modeling for Beginners category. Last week we introduced a whole lot of navigation tools and helped you get situated into the world that you’ll be able to model in. So let’s get started by doing a quick recap of the past weeks and hopefully you’ve done your homework because we’re using that part today to make something more impressive than a cube.

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Day 313: Solid Modeling – Week 3

 

Sketchup planes

This course will all be taught using free software so have no fear, you can do it too! For those just joining us you can find all the posts in this series in the handy Solid modeling for beginners category. For the past two weeks I’ve been going over best practices. The reason is the tools are straightforward to learn, but how we use them is what separates someone who is learning from someone who is a pro. I have had some thoughts about what I wanted to cover this week for that reason, but this week we’re making something and by me we, I mean you! First, let’s do a quick recap of what we’ve learned and we can get started.

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Day 306: Solid Modeling – Week 2

part 18

We’re back again with week 2 of solid modeling for beginners! For those of you just joining in, you can read the introduction (pre-week 1) in this post. You can also find all the posts in this series (including week 1) in the Solid modeling for beginners category. Solid modeling isn’t too difficult, but it does take time and it does mean you need to learn to think about objects in different ways. Week 1 did a great job of introducing this type of thought process and today we’re going to continue from where that left off. Let’s just dive right in!

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Day 299: Solid Modeling – Week 1

Full render

Welcome to solid modeling for beginners! Each week I’ll post some new and exciting things so you can try your hand at solid modeling. It’s easier than it looks to get started and once you do, you’ll be able to create amazing things that you can 3D print, plans to build something really cool, or maybe you just want to create some art! You can do anything you want with solid modeling, that’s the beauty of it! Let’s get started.

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Day 298: A slight delay

Delay

Well today I was planning on posting a quick tutorial for everyone who wanted to learn solid modeling. Have no fear! We’re still going to do it, but that will have to wait to tomorrow. I’ve got a lot going on at the moment and creating a good tutorial from scratch will take a bit of time. What am I doing now? Well, I’m glad you asked.¬†

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Day 297: Solid modeling classes, free for all!

Teaching online

Luckily teaching my course online makes it easier, not harder!

Today marks the start of my summer class. It’s a small group and while it doesn’t directly have anything to do with brain-machine interfaces (frankly none of my research in the lab does) in the age of commercialized 3D printing knowing how to solid model is an important skill that can be applied to basically anything, yes even brain-machine interfaces! Best of all, you can learn with us for free (software included)!

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Day 295: Back in the lab

whole brain and spinal cord dissected

whole brain and spinal cord dissected

“What do you mean, I look nervous!?”

Well it finally happened. We’re doing experiments again. It’s kind of scary to be honest to be working in a hospital again when the pandemic is going on and we have protests still happening. While I could do without the pandemic, I hope with all my heart that the protests don’t end until the corrupt system that caused them ends first.

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Day 292: Thoughts for the day

CS gas

Yeah, totally justified…

Well would you look at that, Seattle issued a ban on CS (tear) gas for 30 days. Yeah, you read that right, 30 days. Why 30 days? Well if I had to bet, I would bet that is exactly how long it will take before they get more. In other words they ran out. They’ve been using so much CS gas that they ran out of it. I have a lot of thoughts today apparently, so let’s just dive into a small stream of consciousness.

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Day 289: Classes started today

protests

Well today we kick off our summer internship courses. It’s just a little hard given everything that is going on in the background, but here we are. It’s tough all around for the black and minority communities, but as an institution we press on to teach. I’m still disheartened that we can’t even pause in a moment of turmoil like this, but institutions like this are part of the system so they can’t meaningfully acknowledge what is going on.

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Day 279: Juggling (a lot of) tasks

task juggling

Since the pandemic hit I’ve had a lot of time to reflect on what I’m doing in school and things that I need to finish. Turns out I’m juggling a lot. I’ve touched on this before in other posts that I have a lot going on, but it never really hit me until recently that I have all these things and none of them seem to be ending. It’s kind of frustrating and extremely anxiety inducing.

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